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You Can Ask for Mental-Health Help, but Can You Find Any? – The Chronicle of Higher Education

Posted: October 28, 2021 at 2:21 am

In a recent town hall, President Biden talked about the mental-health crisis we are experiencing in the wake of the pandemic: If you have a broken spirit, its no different than a broken arm. You shouldnt be ashamed of it. You should seek the help. Theres a lot of people who can help.

But are there?

At this point, I feel pretty confident in saying that everyone in higher education is aware of the mental-health toll the pandemic has taken. Ive written about it (The Staff Are Not OK), others have written about it, studied it, and covered it we are all aware. And while awareness and destigmatization are important when it comes to dealing with mental-issue concerns, weve reached a pivot point where we need to ask, Whats next?

Self-care means seeking help. Just reach out, we are told. But what if so many people are seeking help for mental-health problems that there is no one or nothing available to reach out to?

I have been pretty open about my past mental-health struggles. And I was doing fine during our extended Covid crisis until I wasnt. Last summer, what was supposed to be a week of vacation turned into five days of uncontrollable crying. I wasnt in crisis, but I knew I wasnt doing so well. I messaged my doctor (out of town on what I am sure was a much-needed vacation) and tried to get in to see my therapist (no immediate appointments were available unless it was a crisis).

When it comes to physical health, we often talk about preventative medicine to catch a condition before it becomes a crisis that leads to serious illness and hospitalization. Our insurance (if we are fortunate to have it) usually covers annual check-ups and routine tests. There are tiers of care: When I break my arm, I go to urgent care, but if I am having a heart attack, I go to the emergency room.

While its important to have a system in place for emergencies, its problematic when thats the only form of care readily available. Too often now, the only way to get mental-health treatment is to be in crisis. Everyone else gets put on a waiting list that may take a month, four months, or more. And even for those in crisis, the road to getting the help you need is anything but simple.

More than a decade ago, I did have a mental-health crisis. When things got really bad, I called the number for mental-health services, listed on the back of my insurance card. A recording answered and immediately informed me that if I was having a psychiatric emergency, I should hang up immediately and call 911.

I wasnt thinking about hurting myself or anyone else, so calling 911 didnt seem like the solution. But I also wondered: What would happen if I did? Would I be involuntarily committed? Restrained? Would they send the police and not an ambulance? At the time I had a 1-year-old daughter. What would happen to her if I called 911? What would happen with my job?

I stayed on the phone listening to the voice describing other options, and selected the one I thought might fit my situation. Waiting on hold, I began to practice my story. How do I sound bad enough that they understand I need help but not so bad that they send the cops? I must have told and retold the narrative three or four times to various people on the phone while they tried to get me appointments with doctors and therapists, all while making sure that I was OK and my daughter was OK and that we would continue to be OK until these appointments happened.

I had to bring my 1-year-old to the appointments because I was an adjunct and my husband was a graduate student. We couldnt afford child care, so wed arranged our schedules so that, when one of us was working, the other was off. I was repeatedly asked if I could find anyone to look after my daughter during the counseling sessions (she wouldnt have been there if I could), which only made me feel worse as a parent and a person. Once the medication started working, I stopped going to therapy. (I repeated the same pattern a few years later restarting therapy and then dropping it once I got the medication right.)

Im talking about all of this here because its important to understand what reaching out actually feels like and means in practice to someone in crisis. You are navigating systems and bureaucracies when you are the least capable of doing so, weighing the cost and benefits, deciding just how much to disclose. That is what all of us academics, staff members, students face in making the decision to seek help. Keep in mind that my crisis happened in the best of circumstances: I was fully insured and had relatively secure employment, and we werent in the middle of a pandemic.

Today, the fallout from Covid has placed our mental-health system (such as it is) under even more strain than before. People are reaching out in record numbers, and there simply arent enough trained professionals available to meet the need. We always knew that higher educations mental-health and counseling services were insufficient, but now they have reached a systemic breaking point.

In short, unless you are in crisis, there isnt much hope of seeing a therapist when you need to, let alone trying to find an expert who is attuned to your particular needs. Where you live heavily dictates the services and therapists you have access to, especially for people of color, for those who are LGBTQ, for those whose second language is English, and for people who arent religious. Telemedicine is helping, but the onus is on the person who may or may not be in some sort of crisis to start cold-calling therapists who may or may not take their insurance and may or may not even be taking new patients.

This past summer, when I felt myself struggling, I went looking for a therapist. I called office after office to inquire if they were taking new patients, but all of my messages went unreturned. At some point, I remembered that my employer provided a health-care advocacy service for all employees. I reached out to that service, outlining my issues and what I was looking for in a therapist. I was told that they would start looking immediately, but I should expect to wait at least 10 days to get a response not an appointment, mind you, just a call back with the name of a possible therapist.

Ten days. If it takes professionals who know the terrain and are doing this as their job 10 days to find a therapist for me, think of how much more difficult it is for people searching for help on their own.

The acute shortage of mental-health professionals is not the fault of our colleges and universities, but their reliance on a broken system to cope with the mental-health needs of their employees and students is. We help people in crisis but do little to prevent it from reaching that point. We have flooded the mental-health emergency rooms and urgent-care services, and there is little left for those of us who are teetering on the edge, trying to prevent a fall.

Administrators: Before you tell people on your campus that all they need to do is reach out, be cognizant of what help is actually available when they do. Unless leaders start talking about routine mental-health care, we will never get past the crisis phase.

I am not a mental-health expert, but here is the advice I would offer in this period of heavy demand for services and low supply:

President Biden was right when he said, if you have a broken spirit, its no different than a broken arm. We need to make sure that getting aid for our broken spirits is as straightforward a process as getting an X-ray and a cast for a broken arm.

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Community Newsletter: Twitter dispatches from the American Society of Human Genetics annual meeting – Spectrum

Posted: October 28, 2021 at 2:19 am

Illustration by Laurne Boglio

Hello, and welcome to Spectrums Community Newsletter. In this edition, were coming to you with social media musings from #ASHG21, which took place virtually (again) last week something several attendees lamented online.

According to Twitter chatter, the posters were particularly problematic. For one thing, the sessions offered no way to video chat spontaneously with presenters a serious shortcoming, said Gholson Lyon of Cold Spring Harbor Laboratory in New York. Seems like a no-brainer to do this!

Others struggled to even tune in. Am I dumb? asked Clement Chow, associate professor of human genetics at the University of Utah in Salt Lake City. People tweeting him breadcrumbs to the sessions commiserated, noting that the navigation was painful, the search function didnt work, and they seemed trapped in an endless loop of clicking between sites.

John Belmont, adjunct professor of molecular and human genetics at Baylor College of Medicine in Houston, Texas, held nothing back in a tweet about the virtual assistant chatbot.

And the lack of easy interaction with colleagues disappointed Tuuli Lappalainen, associate professor of systems biology at Colombia University. For me, conferences are less about the specific scientific content and more about connecting with people, she tweeted.

At least for conference attendees who missed the chance to sightsee in Montreal, Canada, where the meeting was originally slated to take place, genetic epidemiologist Marie-Julie Fav of the Ontario Institute for Cancer Research had them covered.

The meetings scientific content didnt disappoint. Spectrum covered some autism-specific findings, including unpublished results from two independent teams on the divergent effects of autism-linked genes on cognition and contributions to the condition coming from noncoding regions of the genome.

Jack Kosmicki, a statistician at Regeneron Genetics Center in Tarrytown, New York, lauded his teams study, published on 18 October in Nature, that sequenced the exomes of 454,787 U.K. Biobank participants and, unlike much previous work, analyzed all of the ancestries represented, not just the European ones.

Collaborator and Regeneron scientist Veera Rajagopal wrote a thread offering up four key insights from the landmark achievement.

Dont forget to register for our 28 October webinar, featuring Zachary J. Williams, a medical and doctoral student at Vanderbilt University in Nashville, Tennessee, who will speak about measuring alexithymia in autistic people.

Thats it for this weeks Community Newsletter! If you have any suggestions for interesting social posts you saw in the autism research sphere, feel free to send an email to chelsey@spectrumnews.org. See you next week!

Cite this article: https://doi.org/10.53053/JOHN8300

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Further and More Detailed Study of Domestic Cat Genome – JD Supra

Posted: October 28, 2021 at 2:19 am

The advent of technology making feasible elucidation of whole genomic sequencing over the past 30 years has led to reports of many if not most important or interesting animal genomes (including the most celebrated results of the Human Genome Project) (see, e.g., "Nautilus pompilius Genome Determined"; "Giraffe Genome Reveals Relevant Adaptations"; "Avocado Genome Elucidated; Durum Wheat Genome Revealed"; "Rose Genome Reveals Its Exquisite Complexities"; "Silver Birch Genetics Explained"; "Genomic Sequence of Strawberry Determined"; "Koala Genome Sequenced"; "Tomato Genome Determined"; "Lowland Gorilla Genome Sequenced"), as well as important historical relationships newly appreciated (see, e.g., "Did Neanderthal DNA Persist in Modern Humans as a Defense against Xenobiotic Viruses?"; "Chicken Origins Established (But Philosophical Questions Remain)"; "Genetic Analyses of Sweet Potato Genome Sheds Light on Speciation and Global Dispersion Patterns"; "The Domestication History of Apples Revealed by Genomic Analysis"; "Evidence of Geographic Change in Central America from Genome Studies of Eciton Ant Species"; "Dolphin Genes Show Relationships between Large Brains and Energy Metabolism Similar to Humans and Elephants").

But what has become evident recently is that most of these genomes were in one way or another incomplete, due typically because there were regions of this or that genome that were resistant to accurate sequencing or come other biologic idiosyncrasy. The most recent example of this reminder of the complexity of biological organisms is our old friend the domestic cat, which built (as most of the new studies do) on the earlier genomic elucidations. In this case, the earlier study in question was published in 2014, when an international effort led by Stephen J. O'Brien at the Oceanographic Center, Nova Southeastern University, Ft. Lauderdale, Florida reported the complete genomic sequencing of the domestic cat, Felix catus. The report, entitled "Annotated features of domestic cat Felis catus genome," was published in GigaScience 2014, 3:13 (August 5, 2014) (see "Domestic Cat Genome Sequenced"). The study reported sequencing of a female Abyssinian cat named Cinnamon, a mixed-breed cat from Russian named Boris, and Sylvester, a wildcat ancestor of domestic cats. The report showed that domestic cats have retained "a highly conserved ancestral mammal genome organization" in comparison with ancestral cats (see Driscoll et al., 2007, "The near eastern origin of cat domestication," Science 317: 51923). Both species, F. catus and Felix silvestris, have 38 chromosomes, 18 pairs of autosomes, and two pairs of dimorphic gender-determining chromosomes. Details of the domestic cat genome structure included the presence of 217 loci of endogenous retrovirus-like elements (amounting to 55.7% of the entire genome, comprised of long interspersed elements (LINEs), short interspersed elements (SINEs), satellite DNA, retroviral long terminal repeats (LTRs) and "others"); 21,865 protein coding genes (open reading frames or ORFs), detected by comparison with eight mammalian genomes (from human, chimpanzee, macaque, dog, cow, horse, rat, and mouse); and a wealth of genetic variability in single nucleotide polymorphisms (SNPs), insertion/deletion events (indels); novel families of complex tandem repeat elements; and short terminal repeat (STR) loci.

The report also contained an extensive comparison between domestic cats and other species ("reference genomes") in terms of gene numbers, using genes with the longest mRNA and corresponding coding sequences (click on table to expand).

More recently, further results of applications of improved genomic sequencing methods and technologies have provided a more comprehensive elucidation of the feline genome and insights into genetic bases for disease. A paper published in the Public Library of Science, entitled "A new domestic cat genome assembly based on long sequence reads empowers feline genomic medicine and identifies a novel gene for dwarfism," PLoS Genetics 16(10): e1008926 on October 20, 2020, reported a revisit of the genomic sequence of Cinnamon, an Abyssinian breed domestic cat previously sequenced. Rather than focusing on one cat, this group* performed whole genome sequencing (WGC) of 54 domestic cats and aligned the sequences to detect single nucleotide variants (SNVs) and structural variants (SVs). The distribution and relatedness of the cats in this study is shown in this graphic:

Their aim was to identify the sequence comprising the ~300,000 gaps in the annotated sequence reported to the Cinnamon Abyssinian, to produce a new reference cat genome denoted in relevant databases as Felis_catus_9.0. This genome comprised 2.84 gigabasepairs (Gb), of which only 1.8% (1.38 megabasepairs, Mb) was not assigned to a specific chromosomal location. The sequencing and comparison identified 19,748 genes, 376 of which were novel (i.e., had not been identified in Cinnamon's DNA) and 178 genes found in the original annotations but not found here. (The authors note the presence of 54 diverse individual cats from which the genes were determined as a possible source of this disparity.) A greater extent of LINE/L1 repetitive elements were detected, which these researchers attributed to better assembly (i.e., the repetitiveness and gaps did not mask these elements in the latest assembly). The average number of SNVs detected per cat was 9.6 million (for comparison humans have ~5 million); inbred cats showed a lower number (~8 million) while outbred cats showed a higher number (> 10.5 million). Of these, researchers detected 128,844 synonymous SNVs in protein-coding sequences (i.e., where the two sequence encoded proteins having the same amino acid sequence), 77,662 missense SNVs (wherein the protein encoded differed in amino acid sequence, including truncated sequences and out-of-frame mutants), and 1,179 loss-of-function (LoF) SNVs. LoF and missense SNVs were associated with depletion in comparisons between orthologous cat and human DNA sequences, whereas synonymous SNVs were enriched by 19.2%. Statistical analyses found that in cats and humans there was selection against missense and LoF SNVs in genes under selective pressure (i.e., where the genetic changes resulted in phenotypes deleterious to individuals carrying them). These results further indicated that these classes of SNVs were not distributed randomly in the cat or human genome.

Turning to structural variants, these researchers detected an average of 44,900 SVs per cat (a frequency four-fold higher than in humans), comprising 134.3 Mb; of the structural variant types, deletions averaged 905 bp, duplications 7,497 bp, insertions 30 bp, and inversions 10,993 bp. In total they reported 208,135 SVs detected in 54 sequenced cat genomes, with 123,731 (60%) were deletions, approximately 39,955 insertions, 35,427 inversions, and 9,022 duplications were identified. The majority of these were common across cat breeds, indicating tolerance. 58.15% of these SVs were intergenic in location, 40.22% intronic, and only 1.06% found in exons, "potentially impacting 217 different protein coding genes. As the scientists noted:

Conversely, the proportion of some SV types found in certain gene regions varied from their genome-wide averages. For example, in regions 5 kb upstream and downstream of genes, duplications were increased approximately two-fold. For exonic regions, 74% of SVs were deletions, an increase from the genome wide level of 59.45%. For 5' untranslated regions (UTRs), the majority of SVs were inversions, which only represent 17.02% of total SVs. These results suggest an interaction between the impact of SV types and the potential function of the gene regions they are found in.

Sixteen of the identified variants were predicted to cause disease, based on comparisons with human genome sequences known to be sufficiently similar. These included one involving a tumor suppressor gene FBXW7 associated with feline mediastinal lymphoma, prevalent in Siamese cats and Oriental shorthaired cats. Other variants detected and their related diseases were in the FAM13B gene, resulting in ectodermal dysplasia (in a random-bred cat); the CYFIP2 gene associated with urate stones (Egyptian mau); and the SH3PXD2A gene, associated with feline infectious peritonitis (random bred cat).

The genetic roots of dwarfish more complicated according to these researchers, involving "a complex deletion coupled with a nearby potential duplication event" on cat chromosome B1, that disrupted the gene for UDP-glucose-6-dehydrogenase (UGDH). This trait is inherited as an autosomal dominant mutant and a breed-standard for Munchkins, characterized by shortened limbs and anormal torso. Here, the scientists report that:

SV analysis within the critical region previously identified by linkage and GWAS on chromosome B1:170,786,914175,975,857 revealed a 3.3 kb deletion at position chrB1:174,882,897174,886,198, overlapping the final exon of UDP-glucose 6-dehydrogenase (UGDH). Upon manual inspection of this SV, a 49 bp segment from exon 8 appeared to be duplicated and inserted 3.5 kb downstream, replacing the deleted sequence. This potentially duplicated segment was flanked by a 37 bp sequence at the 5`end and a 20 bp sequence at the 3' end, both of unknown origin.

(This topography is illustrated in the Figure below.) The scientists further hypothesized that the known activity of the affected gene, UGDH, which is involved in "proteoglycan synthesis in chondrocytes" could effect this phenotype by interfering with development. Evidence for this mechanism was observed in the epiphyseal plate, which in Munchkins showed "a disorganized columnar arrangement" and proteoglycan depletion. They report that sequencing the mRNA produced by the mutant UGDH is yet to be reported, which would perhaps shed light on whether the role of this mutation was as they propose it to be.

This group published a more recent paper in March 2021, entitled "Ultracontinuous Single Haplotype Genome Assemblies for the Domestic Cat (Felis catus) and Asian Leopard Cat (Prionailurus bengalensis)," in the Journal of Heredity, 112(2): 16573, providing additional details relating to its analysis of the domestic cat and leopard cat components of the hybrid genome.

The results reported in these papers illustrated how far we have come and perhaps how far we have to go in using genetic methods for identifying the causes and possible cures for a variety of diseases.

*Reuben M. Buckley, Brian W. Davis, Wesley A. Brashear, Fabiana H. G. Farias, Kei Kuroki, Tina Graves, LaDeana W. Hillier, Milinn Kremitzki, Gang Li, Rondo P. Middleton, Patrick Minx, Chad Tomlinson, Leslie A. Lyons, William J. Murphy, Wesley C. Warren

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MultiMuTHER Team Tracks Expression, Metabolite Relationships in Aging TwinsUK Participants – GenomeWeb

Posted: October 28, 2021 at 2:19 am

NEW YORK Researchers from the UK and Switzerland are teasing out interconnections between gene expression, metabolites, and other genomic features in blood samples from hundreds of individuals over time to better understand the dynamic interactions behind aging and age-related disease.

"Multiomics data also has enormous utility in identifying the functional mechanisms underlying disease states, and linking genetic variants to their downstream effects on physiology," explained King's College London's Kerrin Small, a leader in genomics in the twin research and genetic epidemiology department, who shared the findings at the American Society of Human Genetics annual meeting on Thursday.

As part of the multiomic multiple tissue human expression resource, or MultiMuTHER, project, the researchers used RNA sequencing and metabolomics to track blood gene expression and metabolite profiles, respectively, in samples collected over time from 335 female TwinsUK participants. The participants came from both identical and non-identical twin pairs and ranged in age from roughly 30 to 85 years old at the time of their first sampling visit, Small said, noting that most of the individuals were in their 50s or 60s when the study began.

Over nine years, the team collected three or more samples from each participant, generating RNA-seq profiles for 16,292 genes that were analyzed in whole blood alongside Metabolon-based profiles for nearly 1,200 metabolites in matched blood serum samples.

From these longitudinal samples, the investigators found that the collection of expressed genes tended to remain steady within each individual. And while expression levels were sometimes dialed up or down with age across the participant population, the expression of specific genes sometimes bucked that trend within a subset of individuals, shifting in the opposite direction or remaining steady over time.

"We hope to use the other variables in the dataset to determine whether these individual trajectories are environmentally, clinically, or genetically driven," Small explained, noting that the analyses done so far have taken potentially confounding factors into account, such as participants' age at study onset, seasonality, and the cell type composition of blood samples.

Along with similar analyses on transcript splicing and metabolite profiles in the participants over time, the team went on to unearth more than 105,600 gene expression-metabolite associations, which involved more than 80 percent of the genes and 95 percent of the metabolites analyzed.

"Genes showing longitudinal change over time were found to have a higher number of gene-metabolite associations than those exhibiting stable expression," Small noted, "whereas metabolites exhibiting longitudinal variation did not show a difference in the number of associated genes."

Following up on such associations, the team took a closer look at everything from the nature of the most association-rich metabolites or environmental metabolites impacting gene expression to the stability of gene-metabolite associations over time and related genotypes.

As such analyses continue to progress, the researchers are also planning to layer on clinical phenotype data to try to tease out the potential consequences of the stable and variable associations they are uncovering.

"[W]e have performed one of the largest multiomic longitudinal studies of concurrently measured gene expression and metabolite levels in whole blood, identifying over 100,000 gene-metabolite associations," Small and her co-authors concluded in an abstract for the presentation, arguing that the study "provides novel insight into the interplay between gene expression and metabolites, and may inform systems-wide approaches to projection of temporal progression of age-related diseases."

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National Institutes of Health awards $1.65 million to University of Dayton researchers to study genetic basis of childhood diseases and birth defects…

Posted: October 28, 2021 at 2:18 am

By Dave Larsen

The National Institutes of Health awarded two University of Dayton geneticists a five-year, $1.65 million grant to study how genes regulate three-dimensional patterning and growth during early eye development to understand the genetic basis of childhood retinal diseases and birth defects in the human eye.

Department of Biology professors Amit Singh and Madhuri Kango-Singh are co-principal investigators on the grant, which started Aug. 1 and continues through June 2026. They will use the fruit fly eye model to study the genetic machinery involved in regulating how an eye is formed at the cellular level.

Singhs previous eye development research, funded under a $485,000 National Institutes of Health (NIH) grant awarded in 2017, focused on how genes regulate the process of transforming a single layer of cells into a three-dimensional organ.

That research will expand under the new grant with the addition of Kango-Singh, whose research focus is cancer biology, as co-principal investigator. She will focus on a genetic signaling pathway that regulates growth during eye development.

Not only do you need to make the structure, but it needs to grow to the right size and in the right way, so that you make what would be normal eyes on the heads of flies, said Kango-Singh, who was a co-investigator on the 2017 grant. The same genes function in the development of eyes in other animals and humans, so it could also be interesting to learn about how that process pans out and whether it is involved in birth defects.

Scientists use fruit flies to model human diseases at the cellular and molecular levels because they have similar genetic traits to those of humans. The flys entire life cycle is just 12 days, which allows researchers to study the transmission of hereditary traits and investigate the genetics of disease across at least 24 generations in a year.

Kango-Singh will spearhead the effort to understand how growth pathways regulate this basic process of forming an eye, while Singh will remain focused on the core genetic machinery of eye development.

Their goal is to gain better insights into eye formation, including birth defects associated with a particular transcription factor a protein involved in the controlling expression of other genes.

What we have proposed here is that this transcription factor is required for the placement of the eye on the head of an organism, Singh said. In laymans language, eyes are not the same for all organisms on the head they are placed far apart or close together. We have hypothesized that this transcription factor might be involved in that. It also regulates growth. So, thats the reason we have brought growth and patterning together, and this can be a new component in the eye development machinery.

Despite their separate research interests, the couple has collaborated on a number of projects and publications for more than 27 years. In May 2020, they published the second edition of their well-received book about the fruit fly, Molecular Genetics of Axial Patterning, Growth and Disease in Drosophila Eye.

Under the new NIH grant, Singh and Kango-Singh will each hire a postdoctoral researcher and two graduate assistants to work in their respective labs. In addition, Singh recruited six new undergraduate students for the project. Kango-Singh has six undergraduates working in her lab and hopes to hire three or four more to work on the project.

One of the pillars of UDs vision is experiential learning for undergraduate students, Singh said. We actively involve these students in our research. They are primary authors on peer-reviewed publications. They present at local, regional and international meetings.

He said exposing undergraduate students to cutting-edge research and instrumentation such as the Olympus confocal laser scanning microscope and Zeiss Apotome fluorescence microscope produces well-rounded scientists who are well-prepared for the job market or graduate school.

Kango-Singh, director of the Universitys biology graduate program, credits their NIH grant to the participation of graduate students in their research.

Having a vibrant graduate program at UD in biology is crucial for the success of all faculty with grants, she said. It is the lifeline for success with funding and publications the two things crucial for growing the reputation of the graduate program and the University.

Singh said 70% of their success with the NIH grant is due to the hard work of graduate students. These people are really working 24/7 to make these things happen, he said.

For more information, visit the Department of Biology website.

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Fortune and Great Place to Work Name Amgen One of the World’s Best Workplaces in 2021 – PRNewswire

Posted: October 28, 2021 at 2:18 am

THOUSAND OAKS, Calif., Oct. 26, 2021 /PRNewswire/ --Amgen (NASDAQ: AMGN) today announced that it has been selected as one of the World's Best Workplaces for 2021 by Fortune magazine and Great Place to Work. Amgen ranked eighth among the 25 companies named to the list. Those on the list were selected from 10,000 companies, representing the voices of nearly 20 million employees in more than 100 countries.

"We are very proud of this honor," said Robert A. Bradway, Amgen's chairman and chief executive officer. "To be recognized on a global scale demonstrates our ongoing commitment to providing staff with an environment in which they are able to grow and thrive even during challenging times."

"The World's Best Workplaces are the most sweeping and consistent examples of inclusive company cultures we've ever known," said Michael C. Bush, chief executive officer of Great Place to Work. "In a global workforce, alignment is everything, and these companies are fortifying their culture around the world a nearly impossible feat. Even when tested by the pandemic, these companies recognize sub-communities in each region and their leaders carry an equitable employee experience across cultures."

Earlier this year, Amgen was ranked by Great Place to Work as the seventh best workplace in Europe. Additionally, 25 Amgen affiliates around the world have either been certified or recognized by Great Place to Work nationally. The Fortune World's Best Workplaces list is available at https://www.greatplacetowork.com/best-workplaces-international/world-s-best-workplaces/2021.

About AmgenAmgen is committed to unlocking the potential of biology for patients suffering from serious illnesses by discovering, developing, manufacturing and delivering innovative human therapeutics. This approach begins by using tools like advanced human genetics to unravel the complexities of disease and understand the fundamentals of human biology.

Amgen focuses on areas of high unmet medical need and leverages its expertise to strive for solutions that improve health outcomes and dramatically improve people's lives. A biotechnology pioneer since 1980, Amgen has grown to beone ofthe world'sleadingindependent biotechnology companies, has reached millions of patients around the world and is developing a pipeline of medicines with breakaway potential.

For more information, visitwww.amgen.comand follow us onwww.twitter.com/amgen.

CONTACT: Amgen, Thousand OaksMegan Fox, 805-447-1423 (media)Trish Rowland, 805-447-5631(media)Arvind Sood, 805-447-1060 (investors)

SOURCE Amgen

http://www.amgen.com

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India holds a huge potential for driving the whole genomics industry: Tony Jose, Clevergene – ETHealthworld.com

Posted: October 28, 2021 at 2:18 am

Shahid Akhter, editor, ETHealthworld, spoke to Tony Jose, Co founder and CEO, Clevergene, to know more about current trends in Genomics and the opportunities it offers amidst challenges in India.

Genomics MarketGenomics is a comparatively new field, it has been just 10 years since this field has come into existence. If you really look at the Indian Market for Genomics, its just about 500 cr. This comprises of the discovery genomics as well as the Genetic Diagnostics which is driven by genomics.

If you really look back, 5 years, Genetics was really nonexistent with about 2-3 players, but today we have about 13-14 companies that are operating in this space, both in the discovery genomics as well as the genomics driven diagnostics space. Of these companies, we have 3-4 companies which have the capability and infrastructure to lead this space.

The universities and the academia should also develop the skills that are important for driving this whole industry. When I talk about the skillsets, I am talking about an interdisciplinary team of molecular biologist, Geneticist genomics experts, statisticians and such being trained and given to the industry.

There are mixtures form various races throughout our history and that also gives us a background for looking for Biomarkers to drive diagnosis for personalized medicine and even for drug development so I believe that the country should really grab the opportunity and work towards making India the leader in Genomics for the world.

Clevergene: Journey so farI started my career as a genomics scientist with training at Delhi university. I also had the opportunity to establish the very first high thruput DNA sequencing lab in the country and managed that for about 4 years. This was before I really understood the potential of this field and thought about starting myself. Back in 2013 I didnt have the wherewithal to start a full-fledged genomics laboratory and therefore I started a consulting firm and slowly and steadily we started this company by attracting highly talented individuals. We all come with a basic foundation in human genetics, and this gives us a uniqueness in driving this whole field.

Initially we got into certain strategic tie-ups with publicly funded academic institutions which gave us the infrastructure that is required. We went on to acquire another company which was reasonably funded by equity swapping which gave us the infrastructure that we were looking for and then we built this whole organization to a stage where in Clevergene can boast of being one of the top 3 genomics companies in India in terms of capability as well as capacity.

Within Clevergene we do have 2 business verticals. Genomics has two aspects to it one is in the discovery of novel biomarkers, where we work with academic institutions and Pharma companies that need high end DNA analysis for a particular project for e.g. they are looking for particular biomarkers for breast cancer or identifying biomarkers that can personalize certain cancer treatments etc. and on the other hand we have an applied genomics vertical, we call it The Gene Lab which focusses on diagnosis of pediatric genetic ailments.

There are about 10000 known genetic disorders categorized by the WHO. But the interesting fact is that if you take all of them individually, they are all rare, the incidence rate would be 1 in 10,000 or 1 in 20,000. But if you combine all of them together, we have about 1.6 mn children who are born with any of these disorders every year and there is a huge opportunity gap, or there is a huge gap in diagnosing these disorders.

So The Gene Lab focuses in providing comprehensive genomics based diagnosis for these diseases so that the doctors can manage the patient and even pro-actively prevent the birth of children with genetic disorders in the future.

Clevergene: Future plansSo the roadmap for Clevergene has been discovery diagnostics, screen, prevent and cure. So we have already established ourselves in the discovery genomics field. We are establishing ourselves in the genetic diagnostics field and as we move forward we will expanding our verticals into genetic screening where we are looking at Non-Invasive Genetic Pre-Natal Testing to identify genetic anomalies in fetus. We are also developing a carrier screening method where in the prospective parents can screen and check their carrier status for genetic disorders and therefore identify their risk of passing on a genetic disorder to the child and also look at alternative preventative methods for preventing such events in the future. The active preventative screening would be the way forward for Clevergene so that we together can eradicate many of these rare genetic disorders from the face of the earth.

In a longshot we are also looking at the development of technologies in the space of genome editing, genetic engineering etc. which should provide us with the power to edit a patients genome and even correcting a genetic ailment.

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India holds a huge potential for driving the whole genomics industry: Tony Jose, Clevergene - ETHealthworld.com

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23andMe Honored in Fast Company’s First Annual List of Brands That Matter – Marketscreener.com

Posted: October 28, 2021 at 2:18 am

This week 23andMe made Fast Company's first annual list of "Brands that Matter," an award honoring companies and nonprofits with a mission or ideals that have had a cultural impact and are relevant and authentic.

This new award singles out 95 organizations that, like 23andMe, have inspired people and given them compelling reasons to care about innovation, or social issues, cultural issues, the environment, or their fellow humans. Among those on the list are not just massive multinational conglomerates, but also small companies and nonprofits. All of them have forged an emotional or meaningful connection with people. All were judged on their relevancy, cultural impact, ingenuity, and business innovation.

"Fast Companyis excited to highlight companies and organizations that have built brands with deep meaning and connections to the customers they serve," said Stephanie Mehta, editor-in-chief of Fast Company. "At a time when consumers are holding companies to very high standards, businesses have much to learn from these brands that have garnered respect and trust."

Lead with Science

It's that trust that is probably most important to 23andMe's brand, said Tracy Keim, Vice President of Consumer Marketing and Brand at 23andMe.

"It started with Anne Wojcicki, (23andMe's CEO and Co-Founder)," Tracy said. "She co-founded 23andMe to help people - to be a brand that made a difference in people's lives - we were a brand born out of purpose, not profit."

23andMe is also a brand driven by science. And Fast Company pointed to two of our more recent very large scientific initiatives in singling out 23andMe for this award.

The first was a study using genetics to look at the human impact of the transatlantic slave trade, as part of the largest study to date of people with African ancestry in the Americas. The second is an ongoing study on the genetics associated with differences among people in susceptibility to and severity from COVID-19that involved more than a million research participants. Several findings from that study have already been published or shared, and our researchers are currently investigating the genetics of COVID-19 "long-haulers."

"It's exciting to see this list of brands making a difference," said Tracy. "We're all interested in solutions through action, not just advertising. One of 23andMe's core values is to 'lead with science.' DNA data can tell us so much about problems we confront today and in the future - whether it's studying COVID-19 or our fraught racial history, or important health issues - our team of researchers have big hearts and open minds and go where the science leads them."

Mission Driven

It's been almost two decades since the mapping of the human genome, the most significant scientific breakthrough of our generation. 23andMe works to bring the power of genetic science to everyone. As a brand, 23andMe has always been mission-driven, focused on helping people access, understand, and benefit from the human genome. We created an industry offering people direct access to their genetic information, as well as an opportunity to participate in research if they choose. We share our research findings and ensure that those who participate in research know we've done it through solid science and innovation, but also with whimsy and a human touch.

You can find a complete list of winnershere.

23andMe will be featured along with the other honorees in theNovember issue of Fast Companymagazine, which is available onlinenowand will be on newsstands beginning November 2, 2021.

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23andMe Honored in Fast Company's First Annual List of Brands That Matter - Marketscreener.com

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A lucky few are unusually resistant to COVID-19. Scientists are trying to find a reason in their genes. – Mandurah Mail

Posted: October 28, 2021 at 2:18 am

Some people get severely sick with COVID-19. Others don't even notice they've caught the infection.

Understanding the role of genetic variants in infection outcomes could help prevent or treat infectious diseases by restoring deficient immunity.

Over the past months, several studies have shown that some genes are potentially involved in the congenital resistance some people have towards COVID-19.

Blood types and COVID resistance

For example, the authors wrote that evidence suggested that people with O type blood groups may be slightly more resistant than people with other blood types.

In vitro studies have identified candidate genes that might be involved in how SARS-CoV2 enters human cells and triggers the infection.

SARS-CoV-2 penetrates human cells by binding the ACE2 receptor, which sits in the cell's membrane.

Scientists have discovered that a rare variant located close to ACE2 confers protection against COVID-19.

The hypothesis is that the variant decreases ACE2 expression.

In other in vitro studies, scientists found that some human ACE2 polymorphisms (a gene is polymorphic if more than one allele occupies that gene's locus) bind the SARS-CoV-2 spike protein with different affinities.

The role of genetic variants

Historically, therapeutics for infectious diseases have focused primarily on the pathogen rather than the host.

The most common idea has been to prevent the disease by vaccinating against the pathogen or stop the infection by interfering with the pathogen using drugs.

Understanding the role of genetic variants in infection outcomes could help prevent or treat infectious diseases by restoring deficient immunity.

"These variants are of particular interest for two reasons," the authors wrote.

"First, they can provide a deep understanding of the essential biological pathways involved in infection with SARS-CoV-2.

Second, they will allow for the development of innovative therapeutic interventions to prevent or treat SARS-CoV-2 infection in others."

The proof of principle for this second reason has been provided by CCR5 - a genetic mutation occurring in roughly one per cent of the population, which prevents HIV from binding to the surface of white blood cells.

Medicine mimicking genetics

After discovering CCR5, scientists developed an anti-retroviral drug called maraviroc, which mimics the effect of the mutation.

"No specific drug effective against COVID-19 has been discovered since the start of the pandemic," the authors wrote.

"Lessons learned [from genetics] could potentially guide us toward such specific treatments for COVID-19."

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A lucky few are unusually resistant to COVID-19. Scientists are trying to find a reason in their genes. - Mandurah Mail

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What you need to know about the coronavirus right now – Reuters Australia

Posted: October 28, 2021 at 2:17 am

(Reuters) - Heres what you need to know about the coronavirus right now:

People walk their dog past a sign put up to encourage social distancing along Marina Bay during the coronavirus disease (COVID-19) outbreak, in Singapore, September 29, 2021. REUTERS/Edgar Su

Singapore looking into unusual surge after record cases

Singapores health ministry said it is looking into an unusual surge in infections after the city-state reported 5,324 new cases of COVID-19, the most since the beginning of the pandemic. Singapore also recorded 10 new deaths from the disease, taking its toll to 349.

Singapore extended some of its social-distancing curbs last week to contain the spread of COVID-19 to ease pressure on the health system. Authorities have reimposed curbs that include limiting social interactions and dining out to two people.

COVID infections, deaths dropping across the Americas

COVID-19 is slowly retreating across most of North, Central and South America, the Pan American Health Organization (PAHO) said on Wednesday, reporting that last week the continents death and infection figures were the lowest in more than a year. Many of the larger Caribbean islands are seeing downward trends, including Cuba, the site of a major months-long COVID-19 outbreak.

However, Paraguay saw a doubling of coronavirus cases in the last week and Belize had a sharp jump in COVID-related deaths, the regional branch of the World Health Organization said. Moe than 3 million more vaccine doses will arrive in the region through the COVAX facility this week, as deliveries pick up in the final months of the year, PAHO Assistant Director Jarbas Barbosa said.

White House signals flexibility over Dec. 8 vaccine deadline

The Biden administrations COVID-19 vaccination deadline will not require immediate action on the part of employers against unvaccinated employees when it comes into force on Dec. 8, the White House coronavirus response coordinator said on Wednesday.

The White House comments suggest federal contractors employing millions of U.S. workers have significant flexibility in enforcing COVID-19 rules and will not be required to immediately lay off workers, but will have time for education, counselling and other measures before potentially ending employment.

Genes may explain critical COVID-19 in young, healthy adults

A gene that helps the coronavirus reproduce itself might contribute to life-threatening COVID-19 in young, otherwise healthy people, new findings suggest. Genetic analysis identified five genes that were significantly upregulated, or more active, in COVID-19 patients with critical illness, of which the most frequent was a gene called ADAM9.

As reported on Tuesday in Science Translational Medicine, the researchers saw the same genetic pattern in a separate group of COVID-19 patients. Later, in lab experiments using human lung cells infected with the coronavirus, they found that blocking the activity of the ADAM9 gene made it harder for the virus to make copies of itself. More research is needed, they say, to confirm their findings and to determine whether it would be worthwhile to develop treatments to block ADAM9.

Coronavirus found to infect fat cells

Obesity is a known risk factor for more severe COVID-19. One likely reason may be that the virus can infect fat cells, researchers have discovered. In lab experiments and in autopsies of patients who died of COVID-19, they found the virus infects two types of cells found in fat tissue: mature fat cells, called adipocytes, and immune cells called macrophages.

Infection of fat cells led to a marked inflammatory response, consistent with the type of immune response that is seen in severe cases of COVID-19, said Dr Catherine Blish of Stanford University School of Medicine, whose team reported the findings on bioRxiv on Monday ahead of peer review.

Compiled by Karishma Singh; Editing by Robert Birsel

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What you need to know about the coronavirus right now - Reuters Australia

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